Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--pyruvate transaminase | E0E99_10920 | Not Available | Positive | 2240169 - 2241419 | 46729.8 |
| 4fe-4s dicluster domain-containing protein | E0E99_10925 | Not Available | Negative | 2241454 - 2241927 | 17082.7 |
| iclr family transcriptional regulator yiaj | E0E99_10930 | Not Available | Negative | 2242045 - 2242860 | 29857.0 |
| 3-dehydro-l-gulonate 2-dehydrogenase | E0E99_10935 | Not Available | Positive | 2243078 - 2244076 | 36657.9 |
| yhch/yjgk/yial family protein | E0E99_10940 | Not Available | Positive | 2244088 - 2244552 | 17494.1 |
| duf4862 family protein | E0E99_10945 | Not Available | Positive | 2244566 - 2245498 | 34261.7 |
| mfs transporter | E0E99_10950 | Not Available | Positive | 2245530 - 2246849 | 47488.4 |
| carbohydrate kinase | E0E99_10955 | Not Available | Positive | 2246947 - 2248449 | 54958.3 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | E0E99_10960 | Not Available | Positive | 2248449 - 2249111 | 23487.0 |
| l-ribulose-5-phosphate 3-epimerase | E0E99_10965 | Not Available | Positive | 2249104 - 2249964 | 32406.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

