Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | E0E99_10870 | Not Available | Negative | 2227308 - 2229377 | 76517.8 |
| glycine--trna ligase subunit alpha | E0E99_10875 | Not Available | Negative | 2229387 - 2230298 | 34748.3 |
| hypothetical protein | E0E99_10880 | Not Available | Negative | 2230394 - 2230702 | 11401.7 |
| acyltransferase | E0E99_10885 | Not Available | Positive | 2230875 - 2231870 | 37486.0 |
| hypothetical protein | E0E99_10890 | Not Available | Negative | 2231867 - 2232220 | 12939.5 |
| xylulokinase | E0E99_10895 | Not Available | Negative | 2232388 - 2233842 | 52524.2 |
| xylose isomerase | E0E99_10900 | Not Available | Negative | 2233914 - 2235236 | 49556.5 |
| xylose operon transcription regulator xylr | E0E99_10905 | Not Available | Positive | 2235598 - 2236776 | 44695.3 |
| protein bax | E0E99_10910 | Not Available | Negative | 2236821 - 2237645 | 30908.2 |
| alpha-amylase | E0E99_10915 | Not Available | Positive | 2237962 - 2239992 | 75466.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

