Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family lipoprotein | E0E99_10820 | Not Available | Positive | 2218576 - 2219238 | 22320.7 |
| laci family dna-binding transcriptional regulator | E0E99_10825 | Not Available | Positive | 2219380 - 2220396 | 37038.6 |
| sugar phosphate isomerase/epimerase | E0E99_10830 | Not Available | Positive | 2220496 - 2221245 | 27485.9 |
| sugar kinase | E0E99_10835 | Not Available | Positive | 2221249 - 2222187 | 33344.8 |
| mfs transporter | E0E99_10840 | Not Available | Positive | 2222258 - 2223538 | 47034.1 |
| glyoxylate/hydroxypyruvate reductase ghrb | E0E99_10845 | Not Available | Positive | 2223561 - 2224535 | 35524.7 |
| duf3053 domain-containing protein | E0E99_10850 | Not Available | Negative | 2224594 - 2225304 | 25629.5 |
| hth-type transcriptional regulator | E0E99_10855 | Not Available | Positive | 2225685 - 2225975 | 11167.6 |
| rna chaperone/antiterminator cspa | E0E99_10860 | Not Available | Positive | 2226255 - 2226467 | 7403.66 |
| hypothetical protein | E0E99_10865 | Not Available | Positive | 2226655 - 2227194 | 19558.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

