Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter permease dppb | E0E99_10765 | Not Available | Negative | 2207104 - 2208123 | 37532.5 |
| hypothetical protein | E0E99_10770 | Not Available | Positive | 2208086 - 2208289 | 7510.3 |
| abc transporter substrate-binding protein | E0E99_10775 | Not Available | Negative | 2208290 - 2209897 | 60142.5 |
| Trna-pro | Not Available | Not Available | Positive | 2210727 - 2210803 | Not Available |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | E0E99_10790 | Not Available | Negative | 2210895 - 2212589 | 64620.1 |
| mfs transporter | E0E99_10795 | Not Available | Negative | 2212802 - 2214004 | 42742.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | E0E99_10800 | Not Available | Negative | 2214256 - 2214957 | 25623.6 |
| dna-3-methyladenine glycosylase i | E0E99_10805 | Not Available | Positive | 2215115 - 2215684 | 21290.3 |
| n-acetyltransferase | E0E99_10810 | Not Available | Positive | 2215674 - 2216114 | 16883.9 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | E0E99_10815 | Not Available | Negative | 2216083 - 2218416 | 85862.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

