Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| insulinase family protein | E0E99_10710 | Not Available | Negative | 2194243 - 2195736 | 55477.2 |
| dicarboxylate/amino acid:cation symporter | E0E99_10715 | Not Available | Negative | 2195958 - 2197244 | 45476.2 |
| biofilm formation regulator hmsp | E0E99_10720 | Not Available | Negative | 2197402 - 2199408 | 75425.6 |
| type i toxin-antitoxin system toxin ldr family protein | E0E99_10725 | Not Available | Negative | 2199635 - 2199742 | 3873.89 |
| methionine gamma-lyase | E0E99_10735 | Not Available | Positive | 2200170 - 2201366 | 42896.5 |
| transporter | E0E99_10740 | Not Available | Positive | 2201484 - 2202782 | 48131.4 |
| aaa family atpase | E0E99_10745 | Not Available | Negative | 2202818 - 2204020 | 45397.4 |
| abc transporter atp-binding protein | E0E99_10750 | Not Available | Negative | 2204197 - 2205201 | 37429.6 |
| dipeptide abc transporter atp-binding protein | E0E99_10755 | Not Available | Negative | 2205198 - 2206181 | 35711.5 |
| dipeptide abc transporter permease dppc | E0E99_10760 | Not Available | Negative | 2206192 - 2207094 | 32151.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

