Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | E0E99_10660 | Not Available | Negative | 2184718 - 2185074 | 13455.7 |
| 50s ribosomal protein l35 | E0E99_10665 | Not Available | Negative | 2185130 - 2185327 | 7221.25 |
| translation initiation factor if-3 | E0E99_10670 | Not Available | Negative | 2185424 - 2185966 | 20438.0 |
| threonine--trna ligase | E0E99_10675 | Not Available | Negative | 2185970 - 2187898 | 74059.5 |
| hypothetical protein | E0E99_10680 | Not Available | Negative | 2187986 - 2188246 | 9584.64 |
| gtra family protein | E0E99_10685 | Not Available | Positive | 2188294 - 2188490 | 7359.02 |
| mfs transporter | E0E99_10690 | Not Available | Positive | 2188661 - 2189983 | 47150.8 |
| asma family protein | E0E99_10695 | Not Available | Negative | 2190077 - 2192137 | 74784.2 |
| cyclic-guanylate-specific phosphodiesterase | E0E99_10700 | Not Available | Negative | 2192216 - 2192983 | 29400.6 |
| sugar kinase | E0E99_10705 | Not Available | Positive | 2193214 - 2194143 | 33873.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

