Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | E0E99_10605 | Not Available | Positive | 2174311 - 2175090 | 28585.7 |
| ydiu family protein | E0E99_10610 | Not Available | Negative | 2175087 - 2176529 | 54704.4 |
| eal domain-containing protein | E0E99_10615 | Not Available | Negative | 2176591 - 2177304 | 26490.1 |
| endopeptidase | E0E99_10620 | Not Available | Negative | 2177621 - 2178085 | 17332.7 |
| vitamin b12 abc transporter atp-binding protein btud | E0E99_10625 | Not Available | Negative | 2178163 - 2178912 | 27128.0 |
| glutathione peroxidase | E0E99_10630 | Not Available | Negative | 2178912 - 2179463 | 20393.2 |
| vitamin b12 abc transporter permease btuc | E0E99_10635 | Not Available | Negative | 2179524 - 2180504 | 34934.3 |
| integration host factor subunit alpha | E0E99_10640 | Not Available | Negative | 2180658 - 2180957 | 11382.6 |
| phenylalanine--trna ligase subunit beta | E0E99_10645 | Not Available | Negative | 2180962 - 2183349 | 87142.8 |
| phenylalanine--trna ligase subunit alpha | E0E99_10650 | Not Available | Negative | 2183365 - 2184348 | 36961.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

