Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter ydik | E0E99_10550 | Not Available | Positive | 2161865 - 2162974 | 39714.5 |
| type i 3-dehydroquinate dehydratase | E0E99_10560 | Not Available | Positive | 2163434 - 2164192 | 27582.7 |
| phosphoenolpyruvate synthase | E0E99_10565 | Not Available | Negative | 2164302 - 2166680 | 87224.9 |
| kinase/pyrophosphorylase | E0E99_10570 | Not Available | Positive | 2167008 - 2167841 | 31198.7 |
| 3-deoxy-7-phosphoheptulonate synthase aroh | E0E99_10575 | Not Available | Positive | 2167968 - 2169014 | 38669.2 |
| hemin uptake protein hemp | E0E99_10580 | Not Available | Positive | 2169184 - 2169372 | 6921.26 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | E0E99_10585 | Not Available | Positive | 2169447 - 2171429 | 72113.5 |
| heme oxygenase chus | E0E99_10590 | Not Available | Positive | 2171477 - 2172508 | 38414.6 |
| hemin abc transporter substrate-binding protein | E0E99_10595 | Not Available | Positive | 2172505 - 2173326 | 28885.0 |
| iron abc transporter permease | E0E99_10600 | Not Available | Positive | 2173326 - 2174318 | 34958.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

