Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysin | E0E99_22325 | Not Available | Negative | 4456234 - 4456779 | 19780.9 |
| Holin | E0E99_22330 | Not Available | Negative | 4456751 - 4457029 | 10256.2 |
| Hypothetical protein | E0E99_22335 | Not Available | Negative | 4457185 - 4457373 | 6951.12 |
| Csp | E0E99_22340 | Not Available | Negative | 4458297 - 4458512 | 7645.01 |
| cold shock-like protein cspf | E0E99_22345 | Not Available | Positive | 4458809 - 4459021 | 7546.25 |
| Putative antitermination protein q | E0E99_22350 | Not Available | Negative | 4459345 - 4459692 | 13140.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5 - 120 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 8 - 123 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 202 - 3129 | Not Available |
| universal stress protein uspf | E0E99_00005 | Not Available | Positive | 236 - 664 | 15470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

