Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetrathionate reductase subunit ttra | E0E99_10450 | Not Available | Positive | 2139571 - 2142636 | 110816.0 |
| methionine abc transporter substrate-binding protein | E0E99_10455 | Not Available | Negative | 2142717 - 2143529 | 29534.6 |
| abc transporter permease | E0E99_10460 | Not Available | Negative | 2143551 - 2144219 | 23527.6 |
| atp-binding cassette domain-containing protein | E0E99_10465 | Not Available | Negative | 2144212 - 2145234 | 37439.3 |
| pyruvate kinase pykf | E0E99_10470 | Not Available | Positive | 2145813 - 2147225 | 50646.4 |
| major outer membrane lipoprotein | E0E99_10475 | Not Available | Positive | 2147535 - 2147771 | 8334.87 |
| lysm peptidoglycan-binding domain-containing protein | E0E99_10480 | Not Available | Negative | 2147840 - 2148844 | 36157.7 |
| cysteine desulfuration protein sufe | E0E99_10485 | Not Available | Negative | 2148968 - 2149384 | 15707.1 |
| cysteine desulfurase sufs | E0E99_10490 | Not Available | Negative | 2149397 - 2150617 | 44518.5 |
| fe-s cluster assembly protein sufd | E0E99_10495 | Not Available | Negative | 2150614 - 2151885 | 46928.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

