Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | E0E99_10350 | Not Available | Positive | 2120874 - 2121599 | 26636.1 |
| hypothetical protein | E0E99_10355 | Not Available | Positive | 2121624 - 2122322 | 26155.7 |
| amino acid permease | E0E99_10360 | Not Available | Negative | 2122344 - 2123825 | 53618.3 |
| hypothetical protein | E0E99_10365 | Not Available | Positive | 2124158 - 2124298 | 5167.89 |
| lysr family transcriptional regulator | E0E99_10370 | Not Available | Negative | 2124348 - 2125241 | 33212.8 |
| transporter substrate-binding domain-containing protein | E0E99_10375 | Not Available | Positive | 2125547 - 2126380 | 29600.8 |
| amino acid abc transporter atp-binding protein | E0E99_10380 | Not Available | Positive | 2126382 - 2127200 | 29838.9 |
| amino acid abc transporter permease | E0E99_10385 | Not Available | Positive | 2127200 - 2127985 | 28906.5 |
| amino acid abc transporter permease | E0E99_10390 | Not Available | Positive | 2127975 - 2128652 | 24502.7 |
| hypothetical protein | E0E99_10395 | Not Available | Negative | 2128662 - 2129474 | 28849.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

