Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | E0E99_10280 | Not Available | Negative | 2109242 - 2110528 | 46650.3 |
| universal stress protein | E0E99_10285 | Not Available | Negative | 2110544 - 2110972 | 16233.5 |
| pyrophosphatase | E0E99_10290 | Not Available | Negative | 2110976 - 2111938 | 35223.5 |
| hypothetical protein | E0E99_10295 | Not Available | Positive | 2112190 - 2112423 | 8723.25 |
| duf1471 domain-containing protein | E0E99_10300 | Not Available | Negative | 2112436 - 2112648 | 7299.74 |
| duf3147 family protein | E0E99_10305 | Not Available | Positive | 2112939 - 2113289 | 13294.0 |
| is3 family transposase | E0E99_10315 | Not Available | Positive | 2114271 - 2115421 | 44281.2 |
| duf1471 domain-containing protein | E0E99_10325 | Not Available | Positive | 2116039 - 2116248 | 7165.7 |
| is110 family transposase | E0E99_10340 | Not Available | Positive | 2118815 - 2119837 | 37827.8 |
| is3 family transposase | E0E99_10345 | Not Available | Positive | 2120356 - 2120588 | 8778.02 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

