Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | E0E99_10225 | Not Available | Positive | 2096611 - 2098080 | 52884.8 |
| copper chaperone | E0E99_10230 | Not Available | Positive | 2098426 - 2098617 | 6908.31 |
| hypothetical protein | E0E99_10235 | Not Available | Positive | 2099420 - 2099656 | 8722.6 |
| mipa/ompv family protein | E0E99_10240 | Not Available | Negative | 2100237 - 2101022 | 28469.9 |
| response regulator transcription factor | E0E99_10245 | Not Available | Positive | 2101150 - 2101845 | 25734.3 |
| hamp domain-containing protein | E0E99_10250 | Not Available | Positive | 2101842 - 2103008 | 43238.5 |
| efflux rnd transporter periplasmic adaptor subunit | E0E99_10255 | Not Available | Positive | 2103110 - 2104225 | 39546.4 |
| efflux rnd transporter permease subunit | E0E99_10260 | Not Available | Positive | 2104222 - 2107281 | 109915.0 |
| hypothetical protein | E0E99_10265 | Not Available | Negative | 2107450 - 2107710 | 9637.78 |
| fluoride efflux transporter crcb | E0E99_10270 | Not Available | Negative | 2107820 - 2108194 | 13391.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

