Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | E0E99_10165 | Not Available | Positive | 2086440 - 2087009 | 21238.3 |
| alpa family transcriptional regulator | E0E99_10170 | Not Available | Positive | 2087162 - 2087401 | 9038.89 |
| hypothetical protein | E0E99_10175 | Not Available | Negative | 2087439 - 2087618 | 6052.48 |
| hypothetical protein | E0E99_10180 | Not Available | Positive | 2087691 - 2088110 | 15912.5 |
| hypothetical protein | E0E99_10185 | Not Available | Positive | 2088098 - 2088514 | 15669.8 |
| inovirus gp2 family protein | E0E99_10190 | Not Available | Positive | 2088590 - 2089156 | 20938.2 |
| duf2913 family protein | E0E99_10195 | Not Available | Positive | 2089233 - 2089838 | 21999.5 |
| hypothetical protein | E0E99_10210 | Not Available | Positive | 2091546 - 2091683 | 4921.02 |
| efflux rnd transporter periplasmic adaptor subunit | E0E99_10215 | Not Available | Positive | 2092206 - 2093420 | 42140.5 |
| efflux rnd transporter permease subunit | E0E99_10220 | Not Available | Positive | 2093420 - 2096593 | 113827.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

