Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | E0E99_10110 | Not Available | Negative | 2078510 - 2079328 | 30910.9 |
| duf905 domain-containing protein | E0E99_10115 | Not Available | Negative | 2079432 - 2079665 | 8894.39 |
| hypothetical protein | E0E99_10120 | Not Available | Negative | 2079721 - 2079942 | 8320.09 |
| duf4234 domain-containing protein | E0E99_10125 | Not Available | Negative | 2080024 - 2080536 | 18954.3 |
| hypothetical protein | E0E99_10130 | Not Available | Negative | 2080585 - 2081055 | 16906.0 |
| hypothetical protein | E0E99_10135 | Not Available | Negative | 2081102 - 2081413 | 11309.3 |
| hypothetical protein | E0E99_10140 | Not Available | Negative | 2081426 - 2081692 | 9678.87 |
| wyl domain-containing protein | E0E99_10145 | Not Available | Negative | 2081689 - 2082417 | 27851.4 |
| hypothetical protein | E0E99_10150 | Not Available | Negative | 2082679 - 2082975 | 9472.4 |
| hypothetical protein | E0E99_10155 | Not Available | Negative | 2083325 - 2084293 | 37678.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

