Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 2 operon protein hyba | E0E99_10005 | Not Available | Positive | 2063085 - 2064071 | 35908.8 |
| ni/fe-hydrogenase cytochrome b subunit | E0E99_10010 | Not Available | Positive | 2064061 - 2065239 | 43611.6 |
| hydrogenase 2 large subunit | E0E99_10015 | Not Available | Positive | 2065236 - 2066939 | 62460.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | E0E99_10020 | Not Available | Positive | 2066939 - 2067433 | 17693.8 |
| hydrogenase-2 assembly chaperone | E0E99_10025 | Not Available | Positive | 2067426 - 2067914 | 18155.0 |
| hydrogenase maturation nickel metallochaperone hypa | E0E99_10030 | Not Available | Positive | 2067907 - 2068248 | 12554.8 |
| hydrogenase maturation factor hybg | E0E99_10035 | Not Available | Positive | 2068279 - 2068527 | 8841.7 |
| glutathione-dependent disulfide-bond oxidoreductase | E0E99_10040 | Not Available | Negative | 2068616 - 2069482 | 32396.2 |
| fdhf/ydep family oxidoreductase | E0E99_10045 | Not Available | Positive | 2069700 - 2071988 | 83787.8 |
| bifunctional glutathionylspermidine amidase/synthase | E0E99_10050 | Not Available | Positive | 2072142 - 2074001 | 70525.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

