Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotriesterase-related protein | E0E99_09905 | Not Available | Positive | 2045152 - 2046030 | 32840.4 |
| duf2620 domain-containing protein | E0E99_09910 | Not Available | Positive | 2046041 - 2046394 | 12391.3 |
| hypothetical protein | E0E99_09915 | Not Available | Positive | 2046406 - 2047710 | 46649.5 |
| aminotransferase class v-fold plp-dependent enzyme | E0E99_09920 | Not Available | Positive | 2047724 - 2048818 | 39012.4 |
| duf4223 domain-containing protein | E0E99_09925 | Not Available | Negative | 2048886 - 2049056 | 5946.25 |
| 2,5-didehydrogluconate reductase dkga | E0E99_09930 | Not Available | Negative | 2049240 - 2050067 | 31246.6 |
| alcohol dehydrogenase | E0E99_09935 | Not Available | Negative | 2050172 - 2051335 | 42004.2 |
| arac family transcriptional regulator | E0E99_09940 | Not Available | Positive | 2051530 - 2052429 | 33776.2 |
| deda family protein | E0E99_09945 | Not Available | Negative | 2052499 - 2053158 | 24244.4 |
| cystathionine beta-lyase | E0E99_09950 | Not Available | Negative | 2053290 - 2054477 | 42983.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

