Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | E0E99_09855 | Not Available | Positive | 2035350 - 2036438 | 38933.3 |
| cell division protein damx | E0E99_09860 | Not Available | Positive | 2036535 - 2037836 | 46329.4 |
| adenine-specific dna-methyltransferase | E0E99_09865 | Not Available | Positive | 2037954 - 2038790 | 32167.2 |
| ribulose-phosphate 3-epimerase | E0E99_09870 | Not Available | Positive | 2038808 - 2039485 | 24621.8 |
| phosphoglycolate phosphatase | E0E99_09875 | Not Available | Positive | 2039478 - 2040236 | 27318.6 |
| tryptophan--trna ligase | E0E99_09880 | Not Available | Positive | 2040229 - 2041233 | 37458.9 |
| hypothetical protein | E0E99_09885 | Not Available | Positive | 2041399 - 2042304 | 33395.3 |
| prd domain-containing protein | E0E99_09890 | Not Available | Positive | 2042320 - 2042682 | 13549.5 |
| yhfx family plp-dependent enzyme | E0E99_09895 | Not Available | Positive | 2042766 - 2043929 | 42572.1 |
| phosphopentomutase | E0E99_09900 | Not Available | Positive | 2043929 - 2045155 | 44046.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

