Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family transcriptional regulator | E0E99_09705 | Not Available | Positive | 1997265 - 1998023 | 27916.5 |
| hth-type transcriptional regulator malt | E0E99_09710 | Not Available | Negative | 1998065 - 2000770 | 103145.0 |
| maltodextrin phosphorylase | E0E99_09715 | Not Available | Positive | 2001389 - 2003782 | 90180.8 |
| 4-alpha-glucanotransferase | E0E99_09720 | Not Available | Positive | 2003792 - 2005879 | 78205.5 |
| gluconate transporter | E0E99_09725 | Not Available | Negative | 2005925 - 2007241 | 45896.6 |
| iron-sulfur cluster biogenesis protein nfua | E0E99_09730 | Not Available | Negative | 2007610 - 2008185 | 20936.8 |
| dna utilization protein gntx | E0E99_09735 | Not Available | Negative | 2008244 - 2008927 | 25554.6 |
| pimeloyl-acp methyl ester esterase bioh | E0E99_09740 | Not Available | Positive | 2008965 - 2009735 | 28320.4 |
| rpn family recombination-promoting nuclease/putative transposase | E0E99_09745 | Not Available | Negative | 2009781 - 2010731 | 36117.8 |
| [fe-s]-dependent transcriptional repressor feoc | E0E99_09750 | Not Available | Negative | 2010977 - 2011213 | 8710.72 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

