Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glycosyl transferase/transpeptidase | E0E99_09600 | Not Available | Positive | 1971270 - 1973807 | 94434.2 |
| hypothetical protein | E0E99_09605 | Not Available | Negative | 1974211 - 1975095 | 32630.3 |
| n-acetyltransferase | E0E99_09610 | Not Available | Negative | 1975142 - 1975630 | 18706.6 |
| oxidoreductase | E0E99_09615 | Not Available | Positive | 1976047 - 1977084 | 38743.9 |
| pirin family protein | E0E99_09620 | Not Available | Positive | 1977208 - 1977903 | 26220.7 |
| hth-type transcriptional regulator gntr | E0E99_09625 | Not Available | Positive | 1978033 - 1979028 | 36490.3 |
| gluconokinase | E0E99_09630 | Not Available | Positive | 1979170 - 1979700 | 19472.2 |
| gluconate transporter | E0E99_09635 | Not Available | Positive | 1979700 - 1981040 | 46394.0 |
| hypothetical protein | E0E99_09640 | Not Available | Negative | 1981136 - 1981582 | 16598.0 |
| hypothetical protein | E0E99_09650 | Not Available | Negative | 1982254 - 1982463 | 7744.26 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

