Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | E0E99_09550 | Not Available | Negative | 1961527 - 1961907 | 13873.5 |
| pantoate--beta-alanine ligase | E0E99_09555 | Not Available | Negative | 1962003 - 1962857 | 31765.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | E0E99_09560 | Not Available | Negative | 1962979 - 1963770 | 28240.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | E0E99_09565 | Not Available | Negative | 1963891 - 1964370 | 17825.5 |
| polynucleotide adenylyltransferase | E0E99_09570 | Not Available | Negative | 1964367 - 1965785 | 54754.0 |
| trna glutamyl-q(34) synthetase gluqrs | E0E99_09575 | Not Available | Negative | 1965836 - 1966732 | 33891.4 |
| rna polymerase-binding protein dksa | E0E99_09580 | Not Available | Negative | 1966803 - 1967258 | 17530.7 |
| dna/rna nuclease sfsa | E0E99_09585 | Not Available | Negative | 1967436 - 1968140 | 25978.1 |
| rna 2',3'-cyclic phosphodiesterase | E0E99_09590 | Not Available | Negative | 1968156 - 1968686 | 19795.9 |
| atp-dependent helicase hrpb | E0E99_09595 | Not Available | Positive | 1968715 - 1971189 | 90842.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

