Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0231 family protein | E0E99_09500 | Not Available | Positive | 1951990 - 1952352 | 13995.3 |
| hypothetical protein | E0E99_09505 | Not Available | Negative | 1952386 - 1952733 | 12855.4 |
| multicopper oxidase cueo | E0E99_09510 | Not Available | Positive | 1952887 - 1954497 | 58584.9 |
| hamp domain-containing protein | E0E99_09515 | Not Available | Positive | 1954682 - 1956337 | 59718.4 |
| hypoxanthine phosphoribosyltransferase | E0E99_09520 | Not Available | Positive | 1956589 - 1957125 | 20110.4 |
| carbonate dehydratase | E0E99_09525 | Not Available | Negative | 1957195 - 1957884 | 26028.1 |
| abc transporter atp-binding protein | E0E99_09530 | Not Available | Positive | 1957992 - 1958918 | 34625.1 |
| abc transporter permease | E0E99_09535 | Not Available | Positive | 1958915 - 1959685 | 28592.0 |
| pts sugar transporter subunit iia | E0E99_09540 | Not Available | Positive | 1959789 - 1960229 | 16400.8 |
| polysaccharide deacetylase family protein | E0E99_09545 | Not Available | Positive | 1960291 - 1961520 | 46196.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

