Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | E0E99_09450 | Not Available | Negative | 1934773 - 1936179 | 52937.7 |
| aromatic amino acid transporter arop | E0E99_09455 | Not Available | Negative | 1936337 - 1937707 | 49482.7 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | E0E99_09460 | Not Available | Positive | 1938275 - 1939039 | 29320.1 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | E0E99_09465 | Not Available | Positive | 1939203 - 1941866 | 99634.0 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | E0E99_09470 | Not Available | Positive | 1941881 - 1943770 | 65672.1 |
| dihydrolipoyl dehydrogenase | E0E99_09475 | Not Available | Positive | 1943946 - 1945370 | 50556.3 |
| complement resistance protein trat | E0E99_09480 | Not Available | Positive | 1945565 - 1946296 | 25733.0 |
| duf2950 family protein | E0E99_09485 | Not Available | Negative | 1946360 - 1947154 | 29074.1 |
| duf3300 domain-containing protein | E0E99_09490 | Not Available | Negative | 1947165 - 1948769 | 58560.9 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | E0E99_09495 | Not Available | Positive | 1949218 - 1951815 | 93517.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

