Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | E0E99_09400 | Not Available | Negative | 1925381 - 1926124 | 28345.2 |
| dephospho-coa kinase | E0E99_09405 | Not Available | Negative | 1926124 - 1926744 | 22797.2 |
| gmp reductase | E0E99_09410 | Not Available | Positive | 1926970 - 1928013 | 37189.7 |
| protein transport protein hofc | E0E99_09415 | Not Available | Negative | 1928070 - 1929272 | 44442.9 |
| type ii secretion system protein gspe | E0E99_09420 | Not Available | Negative | 1929262 - 1930644 | 50549.2 |
| prepilin peptidase-dependent pilin | E0E99_09425 | Not Available | Negative | 1930654 - 1931091 | 15788.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | E0E99_09430 | Not Available | Negative | 1931335 - 1932228 | 32929.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | E0E99_09435 | Not Available | Positive | 1932316 - 1932879 | 20781.4 |
| beta-lactamase regulator ampe | E0E99_09440 | Not Available | Positive | 1932876 - 1933730 | 32112.8 |
| alpha-n-arabinofuranosidase | E0E99_09445 | Not Available | Negative | 1933823 - 1934773 | 36544.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

