Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator mraz | E0E99_09300 | Not Available | Positive | 1903243 - 1903701 | 17405.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | E0E99_09305 | Not Available | Positive | 1903703 - 1904644 | 34684.8 |
| cell division protein ftsl | E0E99_09310 | Not Available | Positive | 1904641 - 1905006 | 13586.6 |
| peptidoglycan glycosyltransferase ftsi | E0E99_09315 | Not Available | Positive | 1905022 - 1906788 | 63925.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | E0E99_09320 | Not Available | Positive | 1906775 - 1908262 | 53225.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | E0E99_09325 | Not Available | Positive | 1908259 - 1909617 | 47349.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | E0E99_09330 | Not Available | Positive | 1909611 - 1910693 | 39970.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | E0E99_09335 | Not Available | Positive | 1910696 - 1912012 | 47087.7 |
| cell division protein ftsw | E0E99_09340 | Not Available | Positive | 1912012 - 1913256 | 45904.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | E0E99_09345 | Not Available | Positive | 1913253 - 1914320 | 37765.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

