Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor lexa | E0E99_09250 | Not Available | Negative | 1889586 - 1890194 | 22374.1 |
| diacylglycerol kinase | E0E99_09255 | Not Available | Negative | 1890304 - 1890672 | 13306.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | E0E99_09260 | Not Available | Positive | 1890844 - 1893264 | 91295.9 |
| pilus assembly protein | E0E99_09265 | Not Available | Negative | 1893304 - 1894350 | 38373.1 |
| molecular chaperone | E0E99_09270 | Not Available | Negative | 1894347 - 1895084 | 27291.1 |
| fimbrial biogenesis outer membrane usher protein | E0E99_09275 | Not Available | Negative | 1895100 - 1897634 | 93443.6 |
| transcriptional regulator leuo | E0E99_09280 | Not Available | Positive | 1897960 - 1898907 | 35796.1 |
| acetolactate synthase 3 large subunit | E0E99_09285 | Not Available | Positive | 1899226 - 1900950 | 63070.1 |
| acetolactate synthase small subunit | E0E99_09290 | Not Available | Positive | 1900953 - 1901444 | 18062.0 |
| catabolite repressor/activator | E0E99_09295 | Not Available | Positive | 1901625 - 1902629 | 38041.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

