Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | E0E99_09195 | Not Available | Negative | 1881275 - 1882354 | 39098.0 |
| replicative dna helicase dnab | E0E99_09200 | Not Available | Negative | 1882371 - 1883786 | 52546.4 |
| quinone oxidoreductase | E0E99_09205 | Not Available | Positive | 1883851 - 1884834 | 34932.9 |
| envelope stress response protein pspg | E0E99_09215 | Not Available | Negative | 1885136 - 1885378 | 8950.85 |
| trna dihydrouridine(20/20a) synthase dusa | E0E99_09220 | Not Available | Negative | 1885512 - 1886510 | 37091.5 |
| cupin domain-containing protein | E0E99_09225 | Not Available | Negative | 1886618 - 1887106 | 18510.7 |
| zinc uptake transcriptional repressor zur | E0E99_09230 | Not Available | Positive | 1887222 - 1887740 | 19357.4 |
| csbd family protein | E0E99_09235 | Not Available | Negative | 1887789 - 1887998 | 8296.62 |
| mate family efflux transporter dinf | E0E99_09240 | Not Available | Negative | 1888135 - 1889454 | 47803.4 |
| hypothetical protein | E0E99_09245 | Not Available | Negative | 1889432 - 1889614 | 6344.71 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

