Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf485 domain-containing protein | E0E99_09095 | Not Available | Positive | 1863532 - 1863846 | 11689.5 |
| cation/acetate symporter actp | E0E99_09100 | Not Available | Positive | 1863843 - 1865492 | 59205.6 |
| lrgb family protein | E0E99_09105 | Not Available | Negative | 1865538 - 1866200 | 24019.4 |
| cida/lrga family protein | E0E99_09110 | Not Available | Negative | 1866193 - 1866603 | 15346.7 |
| lysr family transcriptional regulator | E0E99_09115 | Not Available | Positive | 1866705 - 1867595 | 33442.9 |
| hypothetical protein | E0E99_09120 | Not Available | Positive | 1867564 - 1867779 | 8049.72 |
| na+/h+ antiporter | E0E99_09125 | Not Available | Negative | 1867683 - 1869329 | 60407.3 |
| ncs2 family permease | E0E99_09130 | Not Available | Negative | 1869487 - 1870836 | 45727.5 |
| hypothetical protein | E0E99_09135 | Not Available | Positive | 1871003 - 1871206 | 7860.61 |
| redox-sensitive transcriptional activator soxr | E0E99_09140 | Not Available | Negative | 1871436 - 1871894 | 16853.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

