Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | E0E99_09035 | Not Available | Positive | 1847573 - 1848355 | 29025.7 |
| incfii family plasmid replication initiator repa | E0E99_09040 | Not Available | Positive | 1848963 - 1849820 | 33075.2 |
| duf2767 family protein | E0E99_09050 | Not Available | Positive | 1850737 - 1850952 | 8096.65 |
| hypothetical protein | E0E99_09055 | Not Available | Positive | 1851272 - 1854403 | 120953.0 |
| is110-like element is4321 family transposase | E0E99_09060 | Not Available | Negative | 1854756 - 1855760 | 37469.7 |
| cytochrome c nitrite reductase subunit nrfd | E0E99_09070 | Not Available | Negative | 1857234 - 1858190 | 35245.6 |
| cytochrome c nitrite reductase fe-s protein | E0E99_09075 | Not Available | Negative | 1858187 - 1858858 | 24431.4 |
| cytochrome c nitrite reductase pentaheme subunit | E0E99_09080 | Not Available | Negative | 1858855 - 1859421 | 20889.8 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E0E99_09085 | Not Available | Negative | 1859466 - 1860902 | 53698.8 |
| acetate--coa ligase | E0E99_09090 | Not Available | Positive | 1861336 - 1863294 | 72053.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

