Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_08985 | Not Available | Positive | 1831855 - 1832124 | 9860.11 |
| conjugal transfer protein trah | E0E99_08990 | Not Available | Positive | 1832117 - 1833481 | 49035.9 |
| conjugal transfer protein trag | E0E99_08995 | Not Available | Positive | 1833481 - 1836771 | 117665.0 |
| hypothetical protein | E0E99_09000 | Not Available | Positive | 1836786 - 1837355 | 20765.1 |
| complement resistance protein trat | E0E99_09005 | Not Available | Positive | 1837660 - 1838391 | 25766.9 |
| hypothetical protein | E0E99_09010 | Not Available | Positive | 1838443 - 1838784 | 12355.7 |
| cytotoxic protein ccdb | E0E99_09015 | Not Available | Negative | 1838781 - 1839092 | 12056.5 |
| post-segregation antitoxin ccda | E0E99_09020 | Not Available | Negative | 1839089 - 1839337 | 9129.98 |
| type iv conjugative transfer system coupling protein trad | E0E99_09025 | Not Available | Positive | 1839549 - 1842119 | 96411.0 |
| conjugative transfer relaxase/helicase trai | E0E99_09030 | Not Available | Positive | 1842116 - 1847539 | 197976.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

