Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage p4 integrase | E0E99_21235 | Not Available | Positive | 4266584 - 4267849 | 47817.5 |
| Side tail fiber protein | E0E99_22180 | Not Available | Negative | 4434041 - 4434168 | 4442.43 |
| Putative bacteriophage host-specificity protein | E0E99_22185 | Not Available | Negative | 4434209 - 4437613 | 124338.0 |
| Putative bacteriophage tail assembly protein i | E0E99_22190 | Not Available | Negative | 4437686 - 4438363 | 23545.6 |
| Putative bacteriophage tail assembly protein | E0E99_22195 | Not Available | Negative | 4438261 - 4438995 | 27737.5 |
| Putative bacteriophage minor tail protein | E0E99_22200 | Not Available | Negative | 4439007 - 4439702 | 25407.8 |
| Putative minor tail protein | E0E99_22205 | Not Available | Negative | 4439711 - 4440043 | 12722.0 |
| Putative tail component | E0E99_22210 | Not Available | Negative | 4440044 - 4443346 | 116104.0 |
| Putative tail assembly chaperone | E0E99_22215 | Not Available | Negative | 4443346 - 4443573 | 8267.98 |
| Putative tail assembly chaperone | E0E99_22220 | Not Available | Negative | 4443594 - 4443956 | 12976.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

