Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fada | E0E99_08880 | Not Available | Negative | 1813042 - 1814205 | 40995.8 |
| fatty acid oxidation complex subunit alpha fadb | E0E99_08885 | Not Available | Negative | 1814215 - 1816404 | 79609.5 |
| xaa-pro dipeptidase | E0E99_08890 | Not Available | Positive | 1816594 - 1817925 | 50213.8 |
| impact family protein | E0E99_08895 | Not Available | Positive | 1817925 - 1818539 | 21709.0 |
| trk system potassium transporter trkh | E0E99_08900 | Not Available | Positive | 1818578 - 1820029 | 52730.6 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | E0E99_08905 | Not Available | Positive | 1820041 - 1820586 | 20968.0 |
| type iv secretion system protein trac | E0E99_08910 | Not Available | Positive | 1820977 - 1823580 | 97816.5 |
| type-f conjugative transfer system protein trbi | E0E99_08915 | Not Available | Positive | 1823577 - 1823993 | 15000.0 |
| type-f conjugative transfer system protein traw | E0E99_08920 | Not Available | Positive | 1823990 - 1824625 | 23469.1 |
| hypothetical protein | E0E99_08925 | Not Available | Positive | 1824622 - 1824942 | 12431.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

