Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis regulatory protein kinase ubib | E0E99_08830 | Not Available | Positive | 1803656 - 1805296 | 63396.6 |
| sec-independent protein translocase subunit tata | E0E99_08835 | Not Available | Positive | 1805375 - 1805629 | 9026.87 |
| sec-independent protein translocase subunit tatb | E0E99_08840 | Not Available | Positive | 1805633 - 1806181 | 19607.1 |
| sec-independent protein translocase subunit tatc | E0E99_08845 | Not Available | Positive | 1806184 - 1806975 | 29435.6 |
| 3'-5' ssdna/rna exonuclease tatd | E0E99_08850 | Not Available | Positive | 1807017 - 1807799 | 29530.0 |
| transcription/translation regulatory transformer protein rfah | E0E99_08855 | Not Available | Negative | 1807805 - 1808293 | 18256.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | E0E99_08860 | Not Available | Positive | 1808498 - 1809991 | 55774.0 |
| nad(p)h-flavin reductase | E0E99_08865 | Not Available | Positive | 1810032 - 1810733 | 26473.6 |
| rok family protein | E0E99_08870 | Not Available | Positive | 1810961 - 1811875 | 32149.2 |
| laci family transcriptional regulator | E0E99_08875 | Not Available | Positive | 1811883 - 1812863 | 35987.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

