Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l2 | E0E99_08775 | Not Available | Positive | 1792434 - 1793450 | 38831.2 |
| sugar/pyridoxal phosphate phosphatase yigl | E0E99_08780 | Not Available | Positive | 1793466 - 1794266 | 29579.2 |
| dmt family transporter | E0E99_08785 | Not Available | Positive | 1794342 - 1795241 | 33443.6 |
| hth-type transcriptional regulator metr | E0E99_08790 | Not Available | Negative | 1795129 - 1796082 | 35741.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | E0E99_08795 | Not Available | Positive | 1796200 - 1798461 | 84385.6 |
| dienelactone hydrolase family protein | E0E99_08805 | Not Available | Negative | 1798786 - 1799592 | 29172.4 |
| uridine phosphorylase | E0E99_08810 | Not Available | Positive | 1799858 - 1800619 | 27089.6 |
| dna recombination protein rmuc | E0E99_08815 | Not Available | Positive | 1800760 - 1802190 | 54588.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | E0E99_08820 | Not Available | Positive | 1802285 - 1803040 | 28041.7 |
| ubiquinone biosynthesis protein ubij | E0E99_08825 | Not Available | Positive | 1803054 - 1803659 | 22254.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

