Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | E0E99_08725 | Not Available | Positive | 1781242 - 1781958 | 26765.1 |
| dna helicase ii | E0E99_08730 | Not Available | Positive | 1782023 - 1784185 | 82042.8 |
| magnesium/cobalt transporter cora | E0E99_08735 | Not Available | Positive | 1784544 - 1785494 | 36735.9 |
| eama family transporter rard | E0E99_08740 | Not Available | Negative | 1785568 - 1786461 | 33219.9 |
| thioesterase family protein | E0E99_08745 | Not Available | Negative | 1786513 - 1786980 | 17135.7 |
| phospholipase a | E0E99_08750 | Not Available | Positive | 1787146 - 1788015 | 33008.7 |
| atp-dependent dna helicase recq | E0E99_08755 | Not Available | Positive | 1788104 - 1789933 | 68496.1 |
| threonine export protein rhtc | E0E99_08760 | Not Available | Positive | 1789997 - 1790617 | 22494.3 |
| rpn family recombination-promoting nuclease/putative transposase | E0E99_08765 | Not Available | Negative | 1790656 - 1791540 | 33537.9 |
| homoserine/homoserine lactone efflux protein | E0E99_08770 | Not Available | Negative | 1791703 - 1792323 | 22255.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

