Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix biogenesis protein hemy | E0E99_08675 | Not Available | Negative | 1770994 - 1772193 | 45376.9 |
| uroporphyrinogen-iii c-methyltransferase | E0E99_08680 | Not Available | Negative | 1772196 - 1773371 | 42505.6 |
| uroporphyrinogen-iii synthase | E0E99_08685 | Not Available | Negative | 1773393 - 1774133 | 27777.3 |
| hydroxymethylbilane synthase | E0E99_08690 | Not Available | Negative | 1774130 - 1775086 | 34345.7 |
| class i adenylate cyclase | E0E99_08695 | Not Available | Positive | 1775462 - 1778008 | 97383.0 |
| iron donor protein cyay | E0E99_08700 | Not Available | Negative | 1778103 - 1778423 | 12218.0 |
| hypothetical protein | E0E99_08705 | Not Available | Positive | 1778562 - 1778765 | 7175.62 |
| diaminopimelate epimerase | E0E99_08710 | Not Available | Positive | 1778815 - 1779639 | 30285.4 |
| duf484 domain-containing protein | E0E99_08715 | Not Available | Positive | 1779636 - 1780343 | 26798.7 |
| tyrosine recombinase xerc | E0E99_08720 | Not Available | Positive | 1780340 - 1781242 | 33660.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

