Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | E0E99_08575 | Not Available | Negative | 1752309 - 1753790 | 55124.8 |
| atp-dependent rna helicase rhlb | E0E99_08580 | Not Available | Negative | 1753927 - 1755195 | 47139.6 |
| thioredoxin trxa | E0E99_08585 | Not Available | Positive | 1755339 - 1755668 | 11807.2 |
| rho operon leader peptide | E0E99_08590 | Not Available | Positive | 1755799 - 1755918 | 4314.23 |
| transcription termination factor rho | E0E99_08595 | Not Available | Positive | 1756006 - 1757265 | 47009.0 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | E0E99_08600 | Not Available | Positive | 1757504 - 1758607 | 41102.0 |
| eca polysaccharide chain length modulation protein | E0E99_08605 | Not Available | Positive | 1758620 - 1759666 | 39614.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | E0E99_08610 | Not Available | Positive | 1759722 - 1760852 | 42168.9 |
| udp-n-acetyl-d-mannosamine dehydrogenase | E0E99_08615 | Not Available | Positive | 1760849 - 1762111 | 45627.0 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | E0E99_08620 | Not Available | Positive | 1762108 - 1762785 | 24542.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

