Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 2 catalytic subunit | E0E99_08525 | Not Available | Positive | 1739468 - 1741114 | 59259.5 |
| acetolactate synthase 2 small subunit | E0E99_08530 | Not Available | Positive | 1741111 - 1741374 | 9724.75 |
| branched-chain amino acid transaminase | E0E99_08535 | Not Available | Positive | 1741392 - 1742321 | 34116.6 |
| dihydroxy-acid dehydratase | E0E99_08540 | Not Available | Positive | 1742382 - 1744232 | 65681.7 |
| threonine ammonia-lyase, biosynthetic | E0E99_08545 | Not Available | Positive | 1744238 - 1745782 | 56193.5 |
| trans-2-enoyl-coa reductase family protein | E0E99_08550 | Not Available | Negative | 1745846 - 1747039 | 43414.7 |
| hth-type transcriptional activator ilvy | E0E99_08555 | Not Available | Negative | 1747212 - 1748114 | 33509.6 |
| ketol-acid reductoisomerase | E0E99_08560 | Not Available | Positive | 1748279 - 1749754 | 54040.1 |
| peptidylprolyl isomerase c | E0E99_08565 | Not Available | Negative | 1749874 - 1750155 | 10233.6 |
| atp-dependent dna helicase rep | E0E99_08570 | Not Available | Positive | 1750240 - 1752261 | 77061.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

