Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | E0E99_08470 | Not Available | Negative | 1729472 - 1730284 | 30133.9 |
| abc transporter permease | E0E99_08475 | Not Available | Negative | 1730274 - 1731248 | 35694.4 |
| abc transporter substrate-binding protein | E0E99_08480 | Not Available | Negative | 1731248 - 1732870 | 59513.7 |
| tonb-dependent receptor | E0E99_08485 | Not Available | Positive | 1733265 - 1735352 | 76243.5 |
| Trna-asp | Not Available | Not Available | Positive | 1735739 - 1735815 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 1735868 - 1735943 | Not Available |
| hth-type transcriptional regulator hdfr | E0E99_08505 | Not Available | Negative | 1736043 - 1736888 | 32061.1 |
| macrodomain ori organization protein maop | E0E99_08510 | Not Available | Positive | 1736995 - 1737333 | 13174.3 |
| atp-dependent protease | E0E99_08515 | Not Available | Negative | 1737358 - 1738878 | 55071.3 |
| ilv operon leader peptide | E0E99_08520 | Not Available | Positive | 1739230 - 1739328 | 3231.32 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

