Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-binding transcriptional regulator | E0E99_21190 | Not Available | Negative | 4259868 - 4260110 | 9196.0 |
| Head size determination protein sid | E0E99_21195 | Not Available | Negative | 4260107 - 4260910 | 30048.8 |
| Transcriptional regulator | E0E99_21200 | Not Available | Positive | 4261463 - 4261729 | 9771.73 |
| Putative ci repressor | E0E99_21205 | Not Available | Positive | 4261726 - 4262280 | 20443.8 |
| Helper derepression protein | E0E99_21210 | Not Available | Positive | 4262273 - 4262572 | 11233.3 |
| Hypothetical protein | E0E99_21215 | Not Available | Positive | 4262565 - 4263014 | 17424.8 |
| hypothetical protein | E0E99_21220 | Not Available | Positive | 4263119 - 4263346 | 8454.2 |
| Hypothetical protein | E0E99_21225 | Not Available | Positive | 4263343 - 4263663 | 11695.4 |
| Dna primase | E0E99_21230 | Not Available | Positive | 4263675 - 4266008 | 84703.2 |
| Attr | Not Available | Not Available | Positive | 4266367 - 4266380 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

