Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yoaj | E0E99_08420 | Not Available | Positive | 1722075 - 1722149 | 2673.53 |
| glsb/yeaq/ymge family stress response membrane protein | E0E99_08425 | Not Available | Negative | 1722199 - 1722447 | 8663.06 |
| formate dehydrogenase subunit alpha | E0E99_08430 | Not Available | Positive | 1722808 - 1724955 | 79633.0 |
| hypothetical protein | E0E99_08435 | Not Available | Negative | 1725008 - 1725652 | 24821.9 |
| duf1869 domain-containing protein | E0E99_08440 | Not Available | Negative | 1725869 - 1726051 | 6564.57 |
| duf1971 domain-containing protein | E0E99_08445 | Not Available | Negative | 1726055 - 1726417 | 13704.3 |
| leucine efflux protein leue | E0E99_08450 | Not Available | Negative | 1726592 - 1727230 | 23092.9 |
| metal-binding protein zint | E0E99_08455 | Not Available | Negative | 1727370 - 1728020 | 24542.1 |
| atp-binding cassette domain-containing protein | E0E99_08460 | Not Available | Negative | 1728110 - 1728700 | 22091.9 |
| atp-binding cassette domain-containing protein | E0E99_08465 | Not Available | Negative | 1728684 - 1729478 | 29653.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

