Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | E0E99_08370 | Not Available | Positive | 1714505 - 1715995 | 56839.3 |
| ybak/prolyl-trna synthetase associated domain-containing protein | E0E99_08375 | Not Available | Positive | 1716039 - 1716542 | 17957.7 |
| duf441 domain-containing protein | E0E99_08380 | Not Available | Positive | 1716681 - 1717127 | 15289.6 |
| arac family transcriptional regulator | E0E99_08385 | Not Available | Negative | 1717084 - 1717902 | 30577.3 |
| mfs transporter | E0E99_08390 | Not Available | Positive | 1718002 - 1719189 | 40996.5 |
| hypothetical protein | E0E99_08395 | Not Available | Negative | 1719226 - 1719933 | 25640.4 |
| duf488 domain-containing protein | E0E99_08400 | Not Available | Positive | 1720111 - 1720458 | 13477.0 |
| duf333 domain-containing protein | E0E99_08405 | Not Available | Negative | 1720466 - 1720714 | 8680.63 |
| sensor domain-containing diguanylate cyclase | E0E99_08410 | Not Available | Positive | 1720901 - 1721926 | 38583.2 |
| hypothetical protein | E0E99_08415 | Not Available | Positive | 1721974 - 1722072 | 3474.45 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

