Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh nuclease family protein | E0E99_08320 | Not Available | Positive | 1704433 - 1704777 | 13270.6 |
| duf1315 family protein | E0E99_08325 | Not Available | Negative | 1704828 - 1705103 | 10312.5 |
| peptide-methionine (r)-s-oxide reductase | E0E99_08330 | Not Available | Negative | 1705146 - 1705559 | 15511.0 |
| glyceraldehyde-3-phosphate dehydrogenase | E0E99_08335 | Not Available | Positive | 1705901 - 1706896 | 35602.4 |
| d-hexose-6-phosphate mutarotase | E0E99_08340 | Not Available | Positive | 1706980 - 1707864 | 32647.8 |
| aldo/keto reductase | E0E99_08345 | Not Available | Negative | 1707970 - 1708824 | 31189.3 |
| mipa/ompv family protein | E0E99_08350 | Not Available | Negative | 1708985 - 1709731 | 27747.2 |
| prka family serine protein kinase | E0E99_08355 | Not Available | Positive | 1710165 - 1712099 | 74481.3 |
| yeah/yhbh family protein | E0E99_08360 | Not Available | Positive | 1712221 - 1713504 | 49402.0 |
| class i sam-dependent methyltransferase | E0E99_08365 | Not Available | Negative | 1713570 - 1714340 | 28462.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

