Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | E0E99_08220 | Not Available | Negative | 1683005 - 1683628 | 22676.0 |
| carboxymuconolactone decarboxylase family protein | E0E99_08225 | Not Available | Negative | 1683621 - 1684190 | 21198.8 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | E0E99_08230 | Not Available | Positive | 1684267 - 1684683 | 15612.8 |
| duf1496 domain-containing protein | E0E99_08235 | Not Available | Negative | 1684643 - 1684918 | 10093.1 |
| nadp-specific glutamate dehydrogenase | E0E99_08240 | Not Available | Positive | 1685156 - 1686499 | 48567.4 |
| dna topoisomerase iii | E0E99_08245 | Not Available | Negative | 1686588 - 1688534 | 72822.3 |
| selenide, water dikinase seld | E0E99_08250 | Not Available | Negative | 1688539 - 1689582 | 36474.1 |
| nad(p)h nitroreductase | E0E99_08255 | Not Available | Negative | 1689699 - 1690250 | 20087.2 |
| signal peptide peptidase sppa | E0E99_08260 | Not Available | Positive | 1690426 - 1692282 | 67115.9 |
| l-asparaginase 1 | E0E99_08265 | Not Available | Positive | 1692338 - 1693354 | 36915.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

