Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine n-succinyltransferase | E0E99_08170 | Not Available | Negative | 1673090 - 1674124 | 38424.0 |
| aspartate aminotransferase family protein | E0E99_08175 | Not Available | Negative | 1674121 - 1675341 | 43539.0 |
| hypothetical protein | E0E99_08180 | Not Available | Negative | 1675471 - 1675698 | 9005.91 |
| exodeoxyribonuclease iii | E0E99_08185 | Not Available | Positive | 1675786 - 1676592 | 30924.7 |
| tvp38/tmem64 family protein | E0E99_08190 | Not Available | Positive | 1676912 - 1677472 | 20067.0 |
| tvp38/tmem64 family protein | E0E99_08195 | Not Available | Positive | 1677469 - 1678167 | 25596.8 |
| abc transporter substrate-binding protein | E0E99_08200 | Not Available | Positive | 1678199 - 1679368 | 42857.9 |
| thiamine abc transporter permease | E0E99_08205 | Not Available | Positive | 1679341 - 1680876 | 55549.0 |
| atp-binding cassette domain-containing protein | E0E99_08210 | Not Available | Positive | 1680876 - 1681508 | 22972.7 |
| sulfurtransferase | E0E99_08215 | Not Available | Positive | 1681597 - 1682904 | 47984.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

