Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_08060 | Not Available | Negative | 1653830 - 1654366 | 20386.4 |
| hexitol phosphatase hxpb | E0E99_08065 | Not Available | Positive | 1654534 - 1655202 | 24358.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | E0E99_08070 | Not Available | Positive | 1655349 - 1656110 | 27166.6 |
| metal-dependent hydrolase | E0E99_08075 | Not Available | Positive | 1656194 - 1656793 | 22623.1 |
| l-cystine transporter | E0E99_08080 | Not Available | Positive | 1656929 - 1658320 | 48695.9 |
| cell division activator ceda | E0E99_08085 | Not Available | Negative | 1658384 - 1658638 | 9823.95 |
| chitin disaccharide deacetylase | E0E99_08095 | Not Available | Negative | 1659631 - 1660389 | 27961.4 |
| 6-phospho-beta-glucosidase | E0E99_08100 | Not Available | Negative | 1660402 - 1661757 | 50445.1 |
| transcriptional regulator chbr | E0E99_08105 | Not Available | Negative | 1661882 - 1662724 | 33197.6 |
| pts n,n'-diacetylchitobiose transporter subunit iia | E0E99_08110 | Not Available | Negative | 1662735 - 1663082 | 12749.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

