Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_08000 | Not Available | Positive | 1642544 - 1642666 | 4828.74 |
| argr family transcriptional regulator | E0E99_08005 | Not Available | Negative | 1642663 - 1643142 | 17843.7 |
| yfcc family protein | E0E99_08010 | Not Available | Negative | 1643287 - 1644690 | 49913.6 |
| ornithine carbamoyltransferase | E0E99_08015 | Not Available | Negative | 1644746 - 1645750 | 37254.7 |
| carbamate kinase | E0E99_08020 | Not Available | Negative | 1645808 - 1646740 | 33181.0 |
| arginine deiminase | E0E99_08025 | Not Available | Negative | 1646750 - 1647970 | 45817.7 |
| hypothetical protein | E0E99_08040 | Not Available | Positive | 1650387 - 1650494 | 4131.51 |
| duf481 domain-containing protein | E0E99_08045 | Not Available | Negative | 1650659 - 1651417 | 27672.7 |
| 6-phosphofructokinase ii | E0E99_08050 | Not Available | Positive | 1651705 - 1652634 | 32646.2 |
| fructosamine kinase family protein | E0E99_08055 | Not Available | Positive | 1652905 - 1653765 | 32432.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

