Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator trer | E0E99_07945 | Not Available | Negative | 1633046 - 1633993 | 34942.1 |
| hypothetical protein | E0E99_07950 | Not Available | Positive | 1634005 - 1634238 | 9076.99 |
| trap transporter substrate-binding protein | E0E99_07960 | Not Available | Positive | 1637470 - 1638447 | 36335.0 |
| trap transporter small permease | E0E99_07965 | Not Available | Positive | 1638510 - 1639019 | 18563.2 |
| trap transporter large permease | E0E99_07970 | Not Available | Positive | 1639050 - 1640336 | 45966.7 |
| 2-iminobutanoate/2-iminopropanoate deaminase | E0E99_07975 | Not Available | Negative | 1640428 - 1640814 | 13576.2 |
| aspartate carbamoyltransferase regulatory subunit | E0E99_07980 | Not Available | Negative | 1641016 - 1641477 | 17159.6 |
| aspartate carbamoyltransferase | E0E99_07985 | Not Available | Negative | 1641491 - 1642426 | 34365.2 |
| hypothetical protein | E0E99_07990 | Not Available | Negative | 1642429 - 1642482 | 1893.36 |
| pyr operon leader peptide | E0E99_07995 | Not Available | Negative | 1642463 - 1642564 | 3851.85 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

