Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Sos response associated peptidase | E0E99_18460 | Not Available | Positive | 3735635 - 3736303 | 25045.7 |
| Putative dna repair protein | E0E99_18465 | Not Available | Negative | 3736304 - 3736693 | 14224.8 |
| Hypothetical protein | E0E99_18470 | Not Available | Negative | 3736693 - 3736932 | 9391.87 |
| Attr | Not Available | Not Available | Positive | 3736939 - 3736950 | Not Available |
| Putative flippase | E0E99_18475 | Not Available | Positive | 3737186 - 3737382 | 7312.94 |
| Attl | Not Available | Not Available | Positive | 4254483 - 4254496 | Not Available |
| Integrase | E0E99_21170 | Not Available | Positive | 4254666 - 4255943 | 48979.5 |
| atp-binding protein | E0E99_21175 | Not Available | Negative | 4255957 - 4257678 | 62983.6 |
| sir2 family protein | E0E99_21180 | Not Available | Negative | 4257680 - 4258984 | 49512.0 |
| Amber mutation-suppressing protein | E0E99_21185 | Not Available | Negative | 4259276 - 4259851 | 21697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

