Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1 fructose-bisphosphatase | E0E99_07845 | Not Available | Negative | 1613185 - 1614183 | 36627.8 |
| hypothetical protein | E0E99_07850 | Not Available | Positive | 1614246 - 1614440 | 7665.43 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | E0E99_07855 | Not Available | Positive | 1614359 - 1615738 | 50100.2 |
| gnat family n-acetyltransferase | E0E99_07860 | Not Available | Positive | 1615808 - 1616332 | 19998.8 |
| ribosome-associated protein | E0E99_07865 | Not Available | Negative | 1616370 - 1616921 | 21371.5 |
| metalloprotease pmba | E0E99_07870 | Not Available | Positive | 1617017 - 1618369 | 48411.4 |
| cytochrome b562 | E0E99_07875 | Not Available | Positive | 1618416 - 1618802 | 14046.9 |
| glycine dehydrogenase | E0E99_07880 | Not Available | Positive | 1619135 - 1619443 | 11381.5 |
| hypothetical protein | E0E99_07885 | Not Available | Positive | 1619454 - 1619816 | 12457.1 |
| duf4312 family protein | E0E99_07890 | Not Available | Positive | 1619819 - 1620118 | 11329.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

